Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPCS1Q9Y6A9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS1Q9Y6A9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 AC073314.1-201ENST00000568729 2216 ntBASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPCS1Q9Y6A9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS1Q9Y6A9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.4□□□□□ -0.11
SPCS1Q9Y6A9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms