Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC066615.1-201ENST00000640911 628 ntBASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 AC137761.2-201ENST00000561729 223 ntBASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 AC145350.3-201ENST00000569033 163 ntBASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.22■□□□□ 0.99
RAI2Q9Y5P3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 SLC7A5P2-201ENST00000553010 536 ntBASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 RAP2CP1-201ENST00000605103 478 ntBASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAI2Q9Y5P3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 CDCA4P2-201ENST00000441182 718 ntBASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 KRT18P20-201ENST00000548986 1279 ntBASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAI2Q9Y5P3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 AC104771.1-201ENST00000603335 964 ntBASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAI2Q9Y5P3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 UBE2DNL-204ENST00000602536 740 ntBASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 AC120498.10-201ENST00000621827 505 ntBASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.18■□□□□ 0.98
RAI2Q9Y5P3 AC016769.1-201ENST00000409132 1010 ntBASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI2Q9Y5P3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 KRT16P2-201ENST00000414673 1423 ntBASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms