Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSM4Q9Y4Z0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSM4Q9Y4Z0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 TSPY26P-201ENST00000476365 1326 ntBASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
LSM4Q9Y4Z0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
LSM4Q9Y4Z0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.71■□□□□ 0.26
LSM4Q9Y4Z0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
LSM4Q9Y4Z0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 AL137784.2-201ENST00000607332 1000 ntBASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 AL358852.1-201ENST00000623174 1268 ntBASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LSM4Q9Y4Z0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms