Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
UBE2D4Q9Y2X8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.55□□□□□ -0.08
UBE2D4Q9Y2X8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 AP005435.1-201ENST00000529293 1178 ntBASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBE2D4Q9Y2X8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 RNF165-205ENST00000588679 2904 ntBASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 AC121338.2-201ENST00000622535 1744 ntBASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms