Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSR3Q9UNL2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR3Q9UNL2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 PLK5-205ENST00000642079 1969 ntBASIC18.65■□□□□ 0.58
SSR3Q9UNL2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSR3Q9UNL2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSR3Q9UNL2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 RARRES2P2-201ENST00000394842 485 ntBASIC18.64■□□□□ 0.57
SSR3Q9UNL2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.64■□□□□ 0.57
SSR3Q9UNL2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 AC087289.5-201ENST00000586076 3175 ntBASIC18.63■□□□□ 0.57
SSR3Q9UNL2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR3Q9UNL2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 AC137630.3-201ENST00000607245 391 ntBASIC18.62■□□□□ 0.57
SSR3Q9UNL2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 AC027702.1-201ENST00000563810 1770 ntBASIC18.62■□□□□ 0.57
SSR3Q9UNL2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR3Q9UNL2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR3Q9UNL2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR3Q9UNL2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR3Q9UNL2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR3Q9UNL2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SSR3Q9UNL2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR3Q9UNL2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms