Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 AL358852.1-201ENST00000623174 1268 ntBASIC20.24■□□□□ 0.83
SNX6Q9UNH7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.23■□□□□ 0.83
SNX6Q9UNH7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX6Q9UNH7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.21■□□□□ 0.83
SNX6Q9UNH7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX6Q9UNH7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SNX6Q9UNH7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SNX6Q9UNH7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SNX6Q9UNH7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 AC053503.5-201ENST00000601508 636 ntBASIC20.2■□□□□ 0.82
SNX6Q9UNH7 AC005837.3-201ENST00000612163 286 ntBASIC20.2■□□□□ 0.82
SNX6Q9UNH7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNX6Q9UNH7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 TPRG1LP1-201ENST00000598702 760 ntBASIC20.19■□□□□ 0.82
SNX6Q9UNH7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SNX6Q9UNH7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms