Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 UNC93B3-201ENST00000308076 687 ntBASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CAPN11Q9UMQ6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 AL136116.3-201ENST00000402907 1138 ntBASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 IGHV3-19-201ENST00000521488 291 ntBASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CAPN11Q9UMQ6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN11Q9UMQ6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CAPN11Q9UMQ6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CAPN11Q9UMQ6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CAPN11Q9UMQ6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CAPN11Q9UMQ6 AC126544.1-201ENST00000580842 1059 ntBASIC22.64■■□□□ 1.21
CAPN11Q9UMQ6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CAPN11Q9UMQ6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CAPN11Q9UMQ6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CAPN11Q9UMQ6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CAPN11Q9UMQ6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CAPN11Q9UMQ6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 AC024257.2-201ENST00000549699 147 ntBASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CAPN11Q9UMQ6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 AC005224.4-201ENST00000583262 1652 ntBASIC22.62■■□□□ 1.21
CAPN11Q9UMQ6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN11Q9UMQ6 AC027702.1-201ENST00000563810 1770 ntBASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms