Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42EP3Q9UKI2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 ESRRAP1-201ENST00000400596 1257 ntBASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 AL512625.2-201ENST00000417533 625 ntBASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 GCSHP5-201ENST00000443090 522 ntBASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC42EP3Q9UKI2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDC42EP3Q9UKI2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 AC098590.1-201ENST00000468126 897 ntBASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 AC097658.1-201ENST00000475555 843 ntBASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42EP3Q9UKI2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC42EP3Q9UKI2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 AL158047.1-201ENST00000445918 881 ntBASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 RPS2P4-201ENST00000476944 856 ntBASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDC42EP3Q9UKI2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 SLC25A24-204ENST00000569674 2357 ntBASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 AC142381.4-202ENST00000563973 229 ntBASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP3Q9UKI2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms