Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCF1Q9UBD9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 SLC29A4P1-201ENST00000398760 971 ntBASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 AL162412.1-201ENST00000567129 965 ntBASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 C11orf96-202ENST00000528572 1834 ntBASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCF1Q9UBD9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 OR10C1-204ENST00000622521 1039 ntBASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCF1Q9UBD9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 AC069236.1-201ENST00000604339 616 ntBASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 AL591742.1-201ENST00000604433 565 ntBASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCF1Q9UBD9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLCF1Q9UBD9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 AC245052.3-201ENST00000450182 901 ntBASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCF1Q9UBD9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 AL138781.1-201ENST00000566567 1274 ntBASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 AC008694.1-202ENST00000636953 945 ntBASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCF1Q9UBD9 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.62■□□□□ 0.57
CLCF1Q9UBD9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCF1Q9UBD9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCF1Q9UBD9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLCF1Q9UBD9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms