Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 CLDN5-201ENST00000403084 2357 ntBASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLGN3Q9NZ94 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 ITM2C-210ENST00000620962 501 ntBASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NLGN3Q9NZ94 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.52■□□□□ 0.87
NLGN3Q9NZ94 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 AC097658.1-201ENST00000475555 843 ntBASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 RARRES2P4-201ENST00000514074 484 ntBASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 AC061975.6-201ENST00000579045 1553 ntBASIC20.51■□□□□ 0.87
NLGN3Q9NZ94 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 MYC-209ENST00000641252 345 ntBASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 AC010980.2-201ENST00000587099 1412 ntBASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NLGN3Q9NZ94 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 KRT18P29-201ENST00000397031 1267 ntBASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 AC083880.1-201ENST00000608266 535 ntBASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.49■□□□□ 0.87
NLGN3Q9NZ94 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms