Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
SLC52A1Q9NWF4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.45
SLC52A1Q9NWF4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 MIR718-201ENST00000390190 70 ntBASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SLC52A1Q9NWF4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLC52A1Q9NWF4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SLC52A1Q9NWF4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
SLC52A1Q9NWF4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLC52A1Q9NWF4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC30.31■■■□□ 2.44
SLC52A1Q9NWF4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC30.31■■■□□ 2.44
SLC52A1Q9NWF4 RN7SL471P-201ENST00000580476 299 ntBASIC30.31■■■□□ 2.44
SLC52A1Q9NWF4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLC52A1Q9NWF4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC52A1Q9NWF4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC52A1Q9NWF4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC30.3■■■□□ 2.44
SLC52A1Q9NWF4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SLC52A1Q9NWF4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
SLC52A1Q9NWF4 AC092053.2-201ENST00000640557 1818 ntBASIC30.3■■■□□ 2.44
SLC52A1Q9NWF4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
SLC52A1Q9NWF4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC30.29■■■□□ 2.44
SLC52A1Q9NWF4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC30.29■■■□□ 2.44
SLC52A1Q9NWF4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC30.29■■■□□ 2.44
SLC52A1Q9NWF4 KRT18P68-201ENST00000392293 1000 ntBASIC30.29■■■□□ 2.44
SLC52A1Q9NWF4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLC52A1Q9NWF4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLC52A1Q9NWF4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLC52A1Q9NWF4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
SLC52A1Q9NWF4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLC52A1Q9NWF4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 KRT17P3-201ENST00000420566 1262 ntBASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SLC52A1Q9NWF4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SLC52A1Q9NWF4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
SLC52A1Q9NWF4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC30.27■■■□□ 2.44
SLC52A1Q9NWF4 MIR4497-201ENST00000583208 89 ntBASIC30.27■■■□□ 2.44
SLC52A1Q9NWF4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC30.27■■■□□ 2.44
SLC52A1Q9NWF4 NFE2L3P1-201ENST00000588207 1959 ntBASIC30.26■■■□□ 2.44
SLC52A1Q9NWF4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.44
SLC52A1Q9NWF4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
SLC52A1Q9NWF4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SLC52A1Q9NWF4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
SLC52A1Q9NWF4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC30.26■■■□□ 2.43
SLC52A1Q9NWF4 C1QBPP2-201ENST00000528754 825 ntBASIC30.26■■■□□ 2.43
SLC52A1Q9NWF4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC30.26■■■□□ 2.43
SLC52A1Q9NWF4 AC092368.3-202ENST00000574180 1591 ntBASIC30.26■■■□□ 2.43
SLC52A1Q9NWF4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.26■■■□□ 2.43
SLC52A1Q9NWF4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
SLC52A1Q9NWF4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SLC52A1Q9NWF4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 SLC29A4P2-201ENST00000504749 1089 ntBASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SLC52A1Q9NWF4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SLC52A1Q9NWF4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC30.24■■■□□ 2.43
SLC52A1Q9NWF4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC30.24■■■□□ 2.43
SLC52A1Q9NWF4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
SLC52A1Q9NWF4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC30.24■■■□□ 2.43
SLC52A1Q9NWF4 FAM197Y4-202ENST00000622692 608 ntBASIC30.24■■■□□ 2.43
SLC52A1Q9NWF4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SLC52A1Q9NWF4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SLC52A1Q9NWF4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC30.24■■■□□ 2.43
SLC52A1Q9NWF4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms