Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 AL049796.1-201ENST00000565336 1766 ntBASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.36■□□□□ 0.37
LIN7CQ9NUP9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 AP004607.7-201ENST00000527152 1677 ntBASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 AL157384.1-201ENST00000445995 2473 ntBASIC17.35■□□□□ 0.37
LIN7CQ9NUP9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 AC105265.2-201ENST00000467189 838 ntBASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 TSPY26P-201ENST00000476365 1326 ntBASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 AC019069.1-201ENST00000610008 1333 ntBASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LIN7CQ9NUP9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LIN7CQ9NUP9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.33■□□□□ 0.37
LIN7CQ9NUP9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LIN7CQ9NUP9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LIN7CQ9NUP9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LIN7CQ9NUP9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LIN7CQ9NUP9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
LIN7CQ9NUP9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
LIN7CQ9NUP9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LIN7CQ9NUP9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LIN7CQ9NUP9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LIN7CQ9NUP9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LIN7CQ9NUP9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIN7CQ9NUP9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIN7CQ9NUP9 AC003102.1-202ENST00000563394 1796 ntBASIC17.33■□□□□ 0.36
LIN7CQ9NUP9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms