Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 AC006128.1-201ENST00000624704 1661 ntBASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 AP001330.3-201ENST00000520123 633 ntBASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CCM2LQ9NUG4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 AC091305.1-201ENST00000479476 895 ntBASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2LQ9NUG4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.86■□□□□ 0.77
CCM2LQ9NUG4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 DUX4L19-201ENST00000557448 1267 ntBASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2LQ9NUG4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms