Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 BX276092.2-201ENST00000417668 665 ntBASIC21.69■■□□□ 1.06
HPS4Q9NQG7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPS4Q9NQG7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 POU5F1P3-201ENST00000428824 1078 ntBASIC21.68■■□□□ 1.06
HPS4Q9NQG7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 AC003102.1-202ENST00000563394 1796 ntBASIC21.68■■□□□ 1.06
HPS4Q9NQG7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
HPS4Q9NQG7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 AC083880.1-201ENST00000608266 535 ntBASIC21.67■■□□□ 1.06
HPS4Q9NQG7 AC243732.1-201ENST00000612648 864 ntBASIC21.67■■□□□ 1.06
HPS4Q9NQG7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS4Q9NQG7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 AL162412.1-201ENST00000567129 965 ntBASIC21.66■■□□□ 1.06
HPS4Q9NQG7 AC008687.6-201ENST00000596318 630 ntBASIC21.66■■□□□ 1.06
HPS4Q9NQG7 AL591742.1-201ENST00000604433 565 ntBASIC21.66■■□□□ 1.06
HPS4Q9NQG7 MYC-209ENST00000641252 345 ntBASIC21.66■■□□□ 1.06
HPS4Q9NQG7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS4Q9NQG7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPS4Q9NQG7 AC010980.2-201ENST00000587099 1412 ntBASIC21.64■■□□□ 1.06
HPS4Q9NQG7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
HPS4Q9NQG7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.64■■□□□ 1.06
HPS4Q9NQG7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HPS4Q9NQG7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HPS4Q9NQG7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 RARRES2P4-201ENST00000514074 484 ntBASIC21.64■■□□□ 1.05
HPS4Q9NQG7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
HPS4Q9NQG7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.63■■□□□ 1.05
HPS4Q9NQG7 AL117328.2-201ENST00000624617 1940 ntBASIC21.63■■□□□ 1.05
HPS4Q9NQG7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HPS4Q9NQG7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.63■■□□□ 1.05
HPS4Q9NQG7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.63■■□□□ 1.05
HPS4Q9NQG7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HPS4Q9NQG7 ITM2C-210ENST00000620962 501 ntBASIC21.63■■□□□ 1.05
HPS4Q9NQG7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.63■■□□□ 1.05
HPS4Q9NQG7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
HPS4Q9NQG7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms