Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 MIR935-201ENST00000401179 91 ntBASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 AL355001.2-201ENST00000620617 1191 ntBASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 RASA4CP-201ENST00000424092 1398 ntBASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 MIR572-201ENST00000384983 95 ntBASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 AF213884.3-201ENST00000563833 479 ntBASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 AC110285.6-201ENST00000617652 491 ntBASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.13■□□□□ 0.81
LRTM1Q9HBL6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 MIR939-201ENST00000401314 82 ntBASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LRTM1Q9HBL6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 AC091305.1-201ENST00000479476 895 ntBASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
LRTM1Q9HBL6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 LINC01521-201ENST00000504184 1943 ntBASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRTM1Q9HBL6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms