Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.34■■□□□ 1.01
CDC42EP4Q9H3Q1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.34■■□□□ 1.01
CDC42EP4Q9H3Q1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
CDC42EP4Q9H3Q1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDC42EP4Q9H3Q1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42EP4Q9H3Q1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42EP4Q9H3Q1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
CDC42EP4Q9H3Q1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CDC42EP4Q9H3Q1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42EP4Q9H3Q1 AFG3L1P-217ENST00000557444 2447 ntBASIC21.33■■□□□ 1.01
CDC42EP4Q9H3Q1 AP005435.1-201ENST00000529293 1178 ntBASIC21.33■■□□□ 1.01
CDC42EP4Q9H3Q1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42EP4Q9H3Q1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42EP4Q9H3Q1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42EP4Q9H3Q1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42EP4Q9H3Q1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDC42EP4Q9H3Q1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
CDC42EP4Q9H3Q1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.33■■□□□ 1
CDC42EP4Q9H3Q1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42EP4Q9H3Q1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 AL512631.2-201ENST00000604634 923 ntBASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.32■■□□□ 1
CDC42EP4Q9H3Q1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 SERBP1P1-201ENST00000396021 1160 ntBASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 AC121338.2-201ENST00000622535 1744 ntBASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42EP4Q9H3Q1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDC42EP4Q9H3Q1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.29■■□□□ 1
CDC42EP4Q9H3Q1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 AL138724.1-201ENST00000606771 1088 ntBASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.28■■□□□ 1
CDC42EP4Q9H3Q1 AC020907.5-201ENST00000624372 1936 ntBASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 AC007225.1-201ENST00000566331 1836 ntBASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms