Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 IRS3P-201ENST00000223076 1006 ntBASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 MIR638-201ENST00000385237 100 ntBASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC68Q9H2F9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC68Q9H2F9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 AF106564.1-201ENST00000607058 2553 ntBASIC20.92■□□□□ 0.94
CCDC68Q9H2F9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 MIR6084-201ENST00000622012 110 ntBASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC68Q9H2F9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC68Q9H2F9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms