Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC116562.4-201ENST00000641316 2276 ntBASIC16.94■□□□□ 0.3
NKX6-2Q9C056 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 AC073314.1-201ENST00000568729 2216 ntBASIC16.94■□□□□ 0.3
NKX6-2Q9C056 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-2Q9C056 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 AC022616.5-201ENST00000518796 181 ntBASIC16.93■□□□□ 0.3
NKX6-2Q9C056 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX6-2Q9C056 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 AC144652.1-201ENST00000609974 1624 ntBASIC16.92■□□□□ 0.3
NKX6-2Q9C056 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 LONRF2P2-201ENST00000439212 571 ntBASIC16.92■□□□□ 0.3
NKX6-2Q9C056 MIR6765-201ENST00000614092 87 ntBASIC16.92■□□□□ 0.3
NKX6-2Q9C056 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-2Q9C056 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-2Q9C056 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms