Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 C11orf96-202ENST00000528572 1834 ntBASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 ECEL1P3-201ENST00000427961 737 ntBASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 SLC29A4P2-201ENST00000504749 1089 ntBASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC060766.5-201ENST00000590539 871 ntBASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP4-1Q9BYQ7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 UBE2SP1-201ENST00000450587 669 ntBASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 C1QBPP2-201ENST00000528754 825 ntBASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 PNMA6B-201ENST00000538162 1200 ntBASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 FAM21FP-204ENST00000608637 956 ntBASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 HLA-B-256ENST00000639848 1089 ntBASIC10.96□□□□□ -0.65
KRTAP4-1Q9BYQ7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KRTAP4-1Q9BYQ7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC10.96□□□□□ -0.66
KRTAP4-1Q9BYQ7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
KRTAP4-1Q9BYQ7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KRTAP4-1Q9BYQ7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC010542.4-201ENST00000563151 1910 ntBASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC10.95□□□□□ -0.66
KRTAP4-1Q9BYQ7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms