Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 AL512631.2-201ENST00000604634 923 ntBASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CMSS1Q9BQ75 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 AP005435.1-201ENST00000529293 1178 ntBASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 DUX4L19-201ENST00000557448 1267 ntBASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.81■□□□□ 0.44
CMSS1Q9BQ75 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 SERBP1P1-201ENST00000396021 1160 ntBASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CMSS1Q9BQ75 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMSS1Q9BQ75 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 AC136469.2-201ENST00000623944 1028 ntBASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms