Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VGLL1Q99990 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VGLL1Q99990 AP006587.3-201ENST00000525742 1516 ntBASIC15.84■□□□□ 0.13
VGLL1Q99990 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VGLL1Q99990 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.83■□□□□ 0.12
VGLL1Q99990 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.83■□□□□ 0.12
VGLL1Q99990 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VGLL1Q99990 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VGLL1Q99990 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.83■□□□□ 0.12
VGLL1Q99990 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VGLL1Q99990 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
VGLL1Q99990 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.83■□□□□ 0.12
VGLL1Q99990 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.83■□□□□ 0.12
VGLL1Q99990 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.83■□□□□ 0.12
VGLL1Q99990 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VGLL1Q99990 AC011298.3-201ENST00000615796 283 ntBASIC15.83■□□□□ 0.12
VGLL1Q99990 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VGLL1Q99990 AL391422.3-201ENST00000603791 2761 ntBASIC15.83■□□□□ 0.12
VGLL1Q99990 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.83■□□□□ 0.12
VGLL1Q99990 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VGLL1Q99990 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VGLL1Q99990 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VGLL1Q99990 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.82■□□□□ 0.12
VGLL1Q99990 AC138932.1-201ENST00000534164 6830 ntBASIC15.82■□□□□ 0.12
VGLL1Q99990 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
VGLL1Q99990 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.82■□□□□ 0.12
VGLL1Q99990 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VGLL1Q99990 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 AL356441.2-201ENST00000443009 864 ntBASIC15.82■□□□□ 0.12
VGLL1Q99990 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VGLL1Q99990 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.82■□□□□ 0.12
VGLL1Q99990 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.82■□□□□ 0.12
VGLL1Q99990 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.82■□□□□ 0.12
VGLL1Q99990 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VGLL1Q99990 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VGLL1Q99990 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VGLL1Q99990 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VGLL1Q99990 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VGLL1Q99990 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VGLL1Q99990 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VGLL1Q99990 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
VGLL1Q99990 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.81■□□□□ 0.12
VGLL1Q99990 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
VGLL1Q99990 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VGLL1Q99990 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.81■□□□□ 0.12
VGLL1Q99990 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.81■□□□□ 0.12
VGLL1Q99990 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.81■□□□□ 0.12
VGLL1Q99990 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.81■□□□□ 0.12
VGLL1Q99990 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VGLL1Q99990 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VGLL1Q99990 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VGLL1Q99990 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VGLL1Q99990 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VGLL1Q99990 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VGLL1Q99990 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VGLL1Q99990 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VGLL1Q99990 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.8■□□□□ 0.12
VGLL1Q99990 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.8■□□□□ 0.12
VGLL1Q99990 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VGLL1Q99990 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VGLL1Q99990 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
VGLL1Q99990 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VGLL1Q99990 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VGLL1Q99990 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
VGLL1Q99990 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
VGLL1Q99990 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
VGLL1Q99990 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
VGLL1Q99990 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
VGLL1Q99990 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.79■□□□□ 0.12
VGLL1Q99990 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
VGLL1Q99990 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VGLL1Q99990 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VGLL1Q99990 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.79■□□□□ 0.12
VGLL1Q99990 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
VGLL1Q99990 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.79■□□□□ 0.12
VGLL1Q99990 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.79■□□□□ 0.12
VGLL1Q99990 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms