Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL13Q99616 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL13Q99616 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL13Q99616 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL13Q99616 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.57■□□□□ 0.4
CCL13Q99616 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL13Q99616 AC137761.2-201ENST00000561729 223 ntBASIC17.57■□□□□ 0.4
CCL13Q99616 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.57■□□□□ 0.4
CCL13Q99616 AC145350.3-201ENST00000569033 163 ntBASIC17.57■□□□□ 0.4
CCL13Q99616 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL13Q99616 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL13Q99616 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL13Q99616 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCL13Q99616 AC061975.6-201ENST00000579045 1553 ntBASIC17.57■□□□□ 0.4
CCL13Q99616 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL13Q99616 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.57■□□□□ 0.4
CCL13Q99616 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCL13Q99616 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.56■□□□□ 0.4
CCL13Q99616 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.56■□□□□ 0.4
CCL13Q99616 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.56■□□□□ 0.4
CCL13Q99616 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCL13Q99616 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCL13Q99616 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL13Q99616 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
CCL13Q99616 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
CCL13Q99616 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.55■□□□□ 0.4
CCL13Q99616 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.55■□□□□ 0.4
CCL13Q99616 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.55■□□□□ 0.4
CCL13Q99616 SLC7A5P2-201ENST00000553010 536 ntBASIC17.55■□□□□ 0.4
CCL13Q99616 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.55■□□□□ 0.4
CCL13Q99616 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.55■□□□□ 0.4
CCL13Q99616 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.55■□□□□ 0.4
CCL13Q99616 AC022517.1-201ENST00000592429 346 ntBASIC17.55■□□□□ 0.4
CCL13Q99616 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.55■□□□□ 0.4
CCL13Q99616 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL13Q99616 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCL13Q99616 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.54■□□□□ 0.4
CCL13Q99616 AC016769.1-201ENST00000409132 1010 ntBASIC17.54■□□□□ 0.4
CCL13Q99616 POU5F1P4-201ENST00000413175 1085 ntBASIC17.54■□□□□ 0.4
CCL13Q99616 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.54■□□□□ 0.4
CCL13Q99616 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.54■□□□□ 0.4
CCL13Q99616 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCL13Q99616 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.54■□□□□ 0.4
CCL13Q99616 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL13Q99616 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCL13Q99616 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.53■□□□□ 0.4
CCL13Q99616 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCL13Q99616 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCL13Q99616 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL13Q99616 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCL13Q99616 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.53■□□□□ 0.4
CCL13Q99616 AC120498.10-201ENST00000621827 505 ntBASIC17.53■□□□□ 0.4
CCL13Q99616 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCL13Q99616 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCL13Q99616 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.53■□□□□ 0.4
CCL13Q99616 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL13Q99616 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.53■□□□□ 0.4
CCL13Q99616 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL13Q99616 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL13Q99616 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL13Q99616 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.52■□□□□ 0.4
CCL13Q99616 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCL13Q99616 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL13Q99616 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL13Q99616 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL13Q99616 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.52■□□□□ 0.4
CCL13Q99616 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.52■□□□□ 0.4
CCL13Q99616 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCL13Q99616 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms