Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MUC4Q99102 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MUC4Q99102 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MUC4Q99102 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MUC4Q99102 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.28■□□□□ 0.04
MUC4Q99102 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.28■□□□□ 0.04
MUC4Q99102 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MUC4Q99102 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.28■□□□□ 0.04
MUC4Q99102 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MUC4Q99102 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MUC4Q99102 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.28■□□□□ 0.04
MUC4Q99102 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
MUC4Q99102 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MUC4Q99102 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MUC4Q99102 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MUC4Q99102 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MUC4Q99102 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MUC4Q99102 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
MUC4Q99102 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MUC4Q99102 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.27■□□□□ 0.04
MUC4Q99102 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.27■□□□□ 0.04
MUC4Q99102 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MUC4Q99102 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.27■□□□□ 0.03
MUC4Q99102 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MUC4Q99102 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MUC4Q99102 SMUG1P1-201ENST00000590640 811 ntBASIC15.26■□□□□ 0.03
MUC4Q99102 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.26■□□□□ 0.03
MUC4Q99102 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MUC4Q99102 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MUC4Q99102 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MUC4Q99102 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
MUC4Q99102 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MUC4Q99102 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MUC4Q99102 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.26■□□□□ 0.03
MUC4Q99102 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MUC4Q99102 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.26■□□□□ 0.03
MUC4Q99102 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MUC4Q99102 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MUC4Q99102 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MUC4Q99102 AL049796.1-201ENST00000565336 1766 ntBASIC15.26■□□□□ 0.03
MUC4Q99102 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.26■□□□□ 0.03
MUC4Q99102 FEM1AP1-201ENST00000431297 1995 ntBASIC15.25■□□□□ 0.03
MUC4Q99102 AC073314.1-201ENST00000568729 2216 ntBASIC15.25■□□□□ 0.03
MUC4Q99102 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.25■□□□□ 0.03
MUC4Q99102 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.25■□□□□ 0.03
MUC4Q99102 AC091305.1-201ENST00000479476 895 ntBASIC15.25■□□□□ 0.03
MUC4Q99102 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.25■□□□□ 0.03
MUC4Q99102 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
MUC4Q99102 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MUC4Q99102 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MUC4Q99102 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 AC006128.1-201ENST00000624704 1661 ntBASIC15.25■□□□□ 0.03
MUC4Q99102 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 AP005212.1-201ENST00000581547 1997 ntBASIC15.25■□□□□ 0.03
MUC4Q99102 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MUC4Q99102 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.25■□□□□ 0.03
MUC4Q99102 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.25■□□□□ 0.03
MUC4Q99102 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MUC4Q99102 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MUC4Q99102 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.24■□□□□ 0.03
MUC4Q99102 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.24■□□□□ 0.03
MUC4Q99102 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MUC4Q99102 AL136967.2-201ENST00000623968 743 ntBASIC15.24■□□□□ 0.03
MUC4Q99102 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MUC4Q99102 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.24■□□□□ 0.03
MUC4Q99102 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MUC4Q99102 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.24■□□□□ 0.03
MUC4Q99102 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.24■□□□□ 0.03
MUC4Q99102 AC012414.1-201ENST00000556676 535 ntBASIC15.24■□□□□ 0.03
MUC4Q99102 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.23■□□□□ 0.03
MUC4Q99102 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.23■□□□□ 0.03
MUC4Q99102 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms