Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 LSM12P1-201ENST00000411836 588 ntBASIC20.6■□□□□ 0.89
PCDH15Q96QU1 AC091799.1-201ENST00000422823 811 ntBASIC20.6■□□□□ 0.89
PCDH15Q96QU1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDH15Q96QU1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 PNMA6B-201ENST00000538162 1200 ntBASIC20.59■□□□□ 0.89
PCDH15Q96QU1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH15Q96QU1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH15Q96QU1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.58■□□□□ 0.89
PCDH15Q96QU1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH15Q96QU1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH15Q96QU1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH15Q96QU1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH15Q96QU1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH15Q96QU1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.88
PCDH15Q96QU1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH15Q96QU1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 MIR4497-201ENST00000583208 89 ntBASIC20.57■□□□□ 0.88
PCDH15Q96QU1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 FAM21FP-204ENST00000608637 956 ntBASIC20.57■□□□□ 0.88
PCDH15Q96QU1 AC069544.1-201ENST00000609399 999 ntBASIC20.57■□□□□ 0.88
PCDH15Q96QU1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.57■□□□□ 0.88
PCDH15Q96QU1 FAM197Y4-202ENST00000622692 608 ntBASIC20.57■□□□□ 0.88
PCDH15Q96QU1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH15Q96QU1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
PCDH15Q96QU1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH15Q96QU1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH15Q96QU1 AC233263.1-201ENST00000578059 224 ntBASIC20.56■□□□□ 0.88
PCDH15Q96QU1 AC100791.3-201ENST00000617619 330 ntBASIC20.56■□□□□ 0.88
PCDH15Q96QU1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH15Q96QU1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH15Q96QU1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH15Q96QU1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH15Q96QU1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH15Q96QU1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 RPPH1-201ENST00000516869 333 ntBASIC20.55■□□□□ 0.88
PCDH15Q96QU1 C1QBPP2-201ENST00000528754 825 ntBASIC20.55■□□□□ 0.88
PCDH15Q96QU1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH15Q96QU1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH15Q96QU1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH15Q96QU1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms