Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
COL21A1Q96P44 AC123595.1-201ENST00000440769 1046 ntBASIC19.75■□□□□ 0.75
COL21A1Q96P44 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.75■□□□□ 0.75
COL21A1Q96P44 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL21A1Q96P44 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL21A1Q96P44 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL21A1Q96P44 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL21A1Q96P44 AC003102.1-202ENST00000563394 1796 ntBASIC19.75■□□□□ 0.75
COL21A1Q96P44 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL21A1Q96P44 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL21A1Q96P44 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.74■□□□□ 0.75
COL21A1Q96P44 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL21A1Q96P44 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL21A1Q96P44 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
COL21A1Q96P44 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL21A1Q96P44 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.74■□□□□ 0.75
COL21A1Q96P44 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL21A1Q96P44 TPRG1LP1-201ENST00000598702 760 ntBASIC19.74■□□□□ 0.75
COL21A1Q96P44 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL21A1Q96P44 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL21A1Q96P44 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL21A1Q96P44 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL21A1Q96P44 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COL21A1Q96P44 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL21A1Q96P44 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL21A1Q96P44 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL21A1Q96P44 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.73■□□□□ 0.75
COL21A1Q96P44 LINC02228-203ENST00000641970 1355 ntBASIC19.73■□□□□ 0.75
COL21A1Q96P44 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL21A1Q96P44 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL21A1Q96P44 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.73■□□□□ 0.75
COL21A1Q96P44 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.73■□□□□ 0.75
COL21A1Q96P44 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.73■□□□□ 0.75
COL21A1Q96P44 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL21A1Q96P44 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL21A1Q96P44 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL21A1Q96P44 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL21A1Q96P44 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 AC005224.4-201ENST00000583262 1652 ntBASIC19.72■□□□□ 0.75
COL21A1Q96P44 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL21A1Q96P44 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.72■□□□□ 0.75
COL21A1Q96P44 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL21A1Q96P44 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.72■□□□□ 0.75
COL21A1Q96P44 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.72■□□□□ 0.75
COL21A1Q96P44 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL21A1Q96P44 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
COL21A1Q96P44 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.71■□□□□ 0.75
COL21A1Q96P44 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.71■□□□□ 0.75
COL21A1Q96P44 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.71■□□□□ 0.75
COL21A1Q96P44 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COL21A1Q96P44 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.71■□□□□ 0.75
COL21A1Q96P44 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL21A1Q96P44 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.71■□□□□ 0.75
COL21A1Q96P44 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.74
COL21A1Q96P44 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL21A1Q96P44 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL21A1Q96P44 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL21A1Q96P44 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.7■□□□□ 0.74
COL21A1Q96P44 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.7■□□□□ 0.74
COL21A1Q96P44 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.7■□□□□ 0.74
COL21A1Q96P44 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL21A1Q96P44 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL21A1Q96P44 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL21A1Q96P44 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.7■□□□□ 0.74
COL21A1Q96P44 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms