Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 AC073210.2-201ENST00000430369 194 ntBASIC17.05■□□□□ 0.32
ZNF48Q96MX3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF48Q96MX3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 AC093787.1-201ENST00000450396 207 ntBASIC17.04■□□□□ 0.32
ZNF48Q96MX3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 AC008175.2-201ENST00000612840 297 ntBASIC17.04■□□□□ 0.32
ZNF48Q96MX3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF48Q96MX3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 MKRN4P-201ENST00000444706 1521 ntBASIC17.03■□□□□ 0.32
ZNF48Q96MX3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 MIPEPP3-201ENST00000412105 444 ntBASIC17.03■□□□□ 0.32
ZNF48Q96MX3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 AC016405.3-201ENST00000607710 860 ntBASIC17.03■□□□□ 0.32
ZNF48Q96MX3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF48Q96MX3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF48Q96MX3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF48Q96MX3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF48Q96MX3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.02■□□□□ 0.31
ZNF48Q96MX3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF48Q96MX3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.02■□□□□ 0.31
ZNF48Q96MX3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF48Q96MX3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF48Q96MX3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms