Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00477Q96M19 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00477Q96M19 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.67■□□□□ 0.1
LINC00477Q96M19 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00477Q96M19 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC00477Q96M19 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC00477Q96M19 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC00477Q96M19 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00477Q96M19 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LINC00477Q96M19 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00477Q96M19 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00477Q96M19 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00477Q96M19 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00477Q96M19 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00477Q96M19 AC135279.3-201ENST00000610945 1311 ntBASIC15.67■□□□□ 0.1
LINC00477Q96M19 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00477Q96M19 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 AC024257.2-201ENST00000549699 147 ntBASIC15.66■□□□□ 0.1
LINC00477Q96M19 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00477Q96M19 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00477Q96M19 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00477Q96M19 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00477Q96M19 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00477Q96M19 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LINC00477Q96M19 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00477Q96M19 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.65■□□□□ 0.1
LINC00477Q96M19 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LINC00477Q96M19 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00477Q96M19 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00477Q96M19 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00477Q96M19 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00477Q96M19 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC00477Q96M19 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LINC00477Q96M19 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC00477Q96M19 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LINC00477Q96M19 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.64■□□□□ 0.09
LINC00477Q96M19 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 AC105233.4-201ENST00000642045 216 ntBASIC15.64■□□□□ 0.09
LINC00477Q96M19 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LINC00477Q96M19 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00477Q96M19 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00477Q96M19 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC00477Q96M19 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LINC00477Q96M19 AC006128.1-201ENST00000624704 1661 ntBASIC15.63■□□□□ 0.09
LINC00477Q96M19 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LINC00477Q96M19 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
LINC00477Q96M19 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LINC00477Q96M19 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
LINC00477Q96M19 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms