Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP40Q96DI7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP40Q96DI7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP40Q96DI7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 AC139530.1-201ENST00000575312 1977 ntBASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 CYP2T3P-201ENST00000601990 817 ntBASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 FAM21FP-204ENST00000608637 956 ntBASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP40Q96DI7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 AC091799.1-201ENST00000422823 811 ntBASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 AC100791.3-201ENST00000617619 330 ntBASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP40Q96DI7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 MIR718-201ENST00000390190 70 ntBASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 CDV3P1-201ENST00000471403 739 ntBASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 FAM197Y4-202ENST00000622692 608 ntBASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 AC003102.1-202ENST00000563394 1796 ntBASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.9■□□□□ 0.62
SNRNP40Q96DI7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNRNP40Q96DI7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 RPPH1-201ENST00000516869 333 ntBASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 C1QBPP2-201ENST00000528754 825 ntBASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SNRNP40Q96DI7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms