Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.58■□□□□ 0.41
RTN4IP1Q8WWV3 AL049796.1-201ENST00000565336 1766 ntBASIC17.58■□□□□ 0.41
RTN4IP1Q8WWV3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RTN4IP1Q8WWV3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.58■□□□□ 0.41
RTN4IP1Q8WWV3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
RTN4IP1Q8WWV3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTN4IP1Q8WWV3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 AL139246.5-201ENST00000606645 996 ntBASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4IP1Q8WWV3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 AC027682.1-201ENST00000562846 899 ntBASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 AC008764.7-201ENST00000593779 1081 ntBASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4IP1Q8WWV3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 AC126544.1-201ENST00000580842 1059 ntBASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 AL355001.2-201ENST00000620617 1191 ntBASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTN4IP1Q8WWV3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 AC099791.1-201ENST00000416440 715 ntBASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 AP001330.3-201ENST00000520123 633 ntBASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 AC133561.4-201ENST00000566112 224 ntBASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4IP1Q8WWV3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms