Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.77■■□□□ 1.08
CCHCR1Q8TD31 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.77■■□□□ 1.08
CCHCR1Q8TD31 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCHCR1Q8TD31 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCHCR1Q8TD31 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.77■■□□□ 1.07
CCHCR1Q8TD31 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.77■■□□□ 1.07
CCHCR1Q8TD31 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCHCR1Q8TD31 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 IRS3P-201ENST00000223076 1006 ntBASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCHCR1Q8TD31 AP006587.3-201ENST00000525742 1516 ntBASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 MIR572-201ENST00000384983 95 ntBASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCHCR1Q8TD31 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.74■■□□□ 1.07
CCHCR1Q8TD31 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCHCR1Q8TD31 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCHCR1Q8TD31 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 ZNRF2P3-201ENST00000424200 374 ntBASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 AC105233.4-201ENST00000642045 216 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms