Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 C1orf229-201ENST00000623686 2258 ntBASIC18.19■□□□□ 0.5
LINC01560Q8TB33 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 AC006058.3-201ENST00000606217 1069 ntBASIC18.19■□□□□ 0.5
LINC01560Q8TB33 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.19■□□□□ 0.5
LINC01560Q8TB33 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 C9orf163-202ENST00000624034 2573 ntBASIC18.18■□□□□ 0.5
LINC01560Q8TB33 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 AC091799.1-201ENST00000422823 811 ntBASIC18.18■□□□□ 0.5
LINC01560Q8TB33 AC098590.1-201ENST00000468126 897 ntBASIC18.18■□□□□ 0.5
LINC01560Q8TB33 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 C11orf96-202ENST00000528572 1834 ntBASIC18.18■□□□□ 0.5
LINC01560Q8TB33 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01560Q8TB33 KRT17P1-201ENST00000399211 1546 ntBASIC18.18■□□□□ 0.5
LINC01560Q8TB33 AC010542.4-201ENST00000563151 1910 ntBASIC18.17■□□□□ 0.5
LINC01560Q8TB33 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 AC245052.3-201ENST00000450182 901 ntBASIC18.17■□□□□ 0.5
LINC01560Q8TB33 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01560Q8TB33 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 AL158047.1-201ENST00000445918 881 ntBASIC18.16■□□□□ 0.5
LINC01560Q8TB33 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01560Q8TB33 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 AC128676.1-201ENST00000454392 318 ntBASIC18.15■□□□□ 0.5
LINC01560Q8TB33 CDV3P1-201ENST00000471403 739 ntBASIC18.15■□□□□ 0.5
LINC01560Q8TB33 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01560Q8TB33 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms