Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 DUX4L1-201ENST00000627662 1275 ntBASIC20■□□□□ 0.79
SRFBP1Q8NEF9 DUX4L8-201ENST00000629013 1275 ntBASIC20■□□□□ 0.79
SRFBP1Q8NEF9 DUX4L3-201ENST00000630187 1275 ntBASIC20■□□□□ 0.79
SRFBP1Q8NEF9 DUX4L7-201ENST00000630678 1275 ntBASIC20■□□□□ 0.79
SRFBP1Q8NEF9 DUX4L5-201ENST00000630834 1275 ntBASIC20■□□□□ 0.79
SRFBP1Q8NEF9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 AC010141.2-201ENST00000452426 721 ntBASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 AP004607.4-201ENST00000530158 1459 ntBASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRFBP1Q8NEF9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 KRT18P20-201ENST00000548986 1279 ntBASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 RARRES2P6-201ENST00000567333 442 ntBASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 AC104187.1-201ENST00000607510 612 ntBASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRFBP1Q8NEF9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 AC026310.3-201ENST00000625186 2373 ntBASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 AC087623.3-201ENST00000607047 1098 ntBASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRFBP1Q8NEF9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 AC004854.2-201ENST00000608450 1441 ntBASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 AC026271.2-201ENST00000428091 497 ntBASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 AP001160.3-201ENST00000601484 763 ntBASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SRFBP1Q8NEF9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms