Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 AC097381.1-201ENST00000429019 1296 ntBASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIMC1Q8NDZ2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 MIR6821-201ENST00000617625 74 ntBASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SIMC1Q8NDZ2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 EEF1DP3-203ENST00000566025 782 ntBASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 FEM1AP4-201ENST00000443167 1987 ntBASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIMC1Q8NDZ2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIMC1Q8NDZ2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 AC004854.2-201ENST00000608450 1441 ntBASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 KRT87P-202ENST00000534226 1464 ntBASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms