Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.12■■□□□ 1.29
NME8Q8N427 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.12■■□□□ 1.29
NME8Q8N427 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
NME8Q8N427 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NME8Q8N427 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NME8Q8N427 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.12■■□□□ 1.29
NME8Q8N427 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NME8Q8N427 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
NME8Q8N427 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NME8Q8N427 TSPY20P-201ENST00000450910 630 ntBASIC23.11■■□□□ 1.29
NME8Q8N427 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.11■■□□□ 1.29
NME8Q8N427 AC098934.4-201ENST00000564127 592 ntBASIC23.11■■□□□ 1.29
NME8Q8N427 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NME8Q8N427 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.11■■□□□ 1.29
NME8Q8N427 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NME8Q8N427 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NME8Q8N427 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NME8Q8N427 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.1■■□□□ 1.29
NME8Q8N427 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
NME8Q8N427 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.1■■□□□ 1.29
NME8Q8N427 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.1■■□□□ 1.29
NME8Q8N427 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.1■■□□□ 1.29
NME8Q8N427 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NME8Q8N427 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NME8Q8N427 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
NME8Q8N427 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
NME8Q8N427 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 AC010980.2-201ENST00000587099 1412 ntBASIC23.09■■□□□ 1.29
NME8Q8N427 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
NME8Q8N427 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 BX276092.2-201ENST00000417668 665 ntBASIC23.09■■□□□ 1.29
NME8Q8N427 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.09■■□□□ 1.29
NME8Q8N427 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.09■■□□□ 1.29
NME8Q8N427 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NME8Q8N427 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
NME8Q8N427 AC026471.6-201ENST00000622954 1905 ntBASIC23.08■■□□□ 1.29
NME8Q8N427 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NME8Q8N427 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NME8Q8N427 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.08■■□□□ 1.29
NME8Q8N427 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.08■■□□□ 1.29
NME8Q8N427 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.08■■□□□ 1.29
NME8Q8N427 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NME8Q8N427 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.07■■□□□ 1.28
NME8Q8N427 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NME8Q8N427 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.07■■□□□ 1.28
NME8Q8N427 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.07■■□□□ 1.28
NME8Q8N427 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
NME8Q8N427 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NME8Q8N427 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NME8Q8N427 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
NME8Q8N427 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NME8Q8N427 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NME8Q8N427 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NME8Q8N427 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.07■■□□□ 1.28
NME8Q8N427 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
NME8Q8N427 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NME8Q8N427 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NME8Q8N427 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NME8Q8N427 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NME8Q8N427 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.06■■□□□ 1.28
NME8Q8N427 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
NME8Q8N427 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NME8Q8N427 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NME8Q8N427 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NME8Q8N427 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NME8Q8N427 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NME8Q8N427 CLDN5-201ENST00000403084 2357 ntBASIC23.05■■□□□ 1.28
NME8Q8N427 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.05■■□□□ 1.28
NME8Q8N427 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
NME8Q8N427 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NME8Q8N427 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NME8Q8N427 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.05■■□□□ 1.28
NME8Q8N427 AC091799.1-201ENST00000422823 811 ntBASIC23.05■■□□□ 1.28
NME8Q8N427 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.05■■□□□ 1.28
NME8Q8N427 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
NME8Q8N427 AC245052.3-201ENST00000450182 901 ntBASIC23.05■■□□□ 1.28
NME8Q8N427 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.05■■□□□ 1.28
NME8Q8N427 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.05■■□□□ 1.28
NME8Q8N427 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.05■■□□□ 1.28
NME8Q8N427 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.05■■□□□ 1.28
NME8Q8N427 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.05■■□□□ 1.28
NME8Q8N427 AC010542.4-201ENST00000563151 1910 ntBASIC23.05■■□□□ 1.28
NME8Q8N427 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
NME8Q8N427 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.05■■□□□ 1.28
NME8Q8N427 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NME8Q8N427 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.04■■□□□ 1.28
NME8Q8N427 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NME8Q8N427 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NME8Q8N427 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.04■■□□□ 1.28
NME8Q8N427 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NME8Q8N427 FAM99A-202ENST00000538190 1989 ntBASIC23.04■■□□□ 1.28
NME8Q8N427 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms