Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 AC079140.4-201ENST00000507448 529 ntBASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 AL121603.2-201ENST00000557373 2117 ntBASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 EEF1DP3-203ENST00000566025 782 ntBASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CPNE9Q8IYJ1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.69■□□□□ 0.9
CPNE9Q8IYJ1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 AL049796.1-201ENST00000565336 1766 ntBASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 AC053503.5-201ENST00000601508 636 ntBASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 LINC02228-203ENST00000641970 1355 ntBASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE9Q8IYJ1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 KRT87P-202ENST00000534226 1464 ntBASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE9Q8IYJ1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 YBX1P1-201ENST00000445822 960 ntBASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE9Q8IYJ1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE9Q8IYJ1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE9Q8IYJ1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms