Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX60Q8IY21 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
DDX60Q8IY21 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX60Q8IY21 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX60Q8IY21 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
DDX60Q8IY21 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX60Q8IY21 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX60Q8IY21 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX60Q8IY21 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX60Q8IY21 PRORSD1P-201ENST00000295112 541 ntBASIC26.1■■□□□ 1.77
DDX60Q8IY21 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.1■■□□□ 1.77
DDX60Q8IY21 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX60Q8IY21 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX60Q8IY21 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX60Q8IY21 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX60Q8IY21 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.1■■□□□ 1.77
DDX60Q8IY21 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
DDX60Q8IY21 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.09■■□□□ 1.77
DDX60Q8IY21 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
DDX60Q8IY21 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX60Q8IY21 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX60Q8IY21 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.09■■□□□ 1.77
DDX60Q8IY21 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX60Q8IY21 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.09■■□□□ 1.77
DDX60Q8IY21 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.09■■□□□ 1.77
DDX60Q8IY21 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX60Q8IY21 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.09■■□□□ 1.77
DDX60Q8IY21 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX60Q8IY21 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
DDX60Q8IY21 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
DDX60Q8IY21 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.08■■□□□ 1.77
DDX60Q8IY21 FAM21FP-204ENST00000608637 956 ntBASIC26.08■■□□□ 1.77
DDX60Q8IY21 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX60Q8IY21 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.08■■□□□ 1.77
DDX60Q8IY21 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.08■■□□□ 1.77
DDX60Q8IY21 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
DDX60Q8IY21 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX60Q8IY21 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.08■■□□□ 1.77
DDX60Q8IY21 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.08■■□□□ 1.76
DDX60Q8IY21 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.08■■□□□ 1.76
DDX60Q8IY21 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
DDX60Q8IY21 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DDX60Q8IY21 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.07■■□□□ 1.76
DDX60Q8IY21 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DDX60Q8IY21 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX60Q8IY21 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX60Q8IY21 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DDX60Q8IY21 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.07■■□□□ 1.76
DDX60Q8IY21 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.07■■□□□ 1.76
DDX60Q8IY21 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.07■■□□□ 1.76
DDX60Q8IY21 AC097658.1-201ENST00000475555 843 ntBASIC26.07■■□□□ 1.76
DDX60Q8IY21 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
DDX60Q8IY21 UNC93B5-201ENST00000530315 699 ntBASIC26.07■■□□□ 1.76
DDX60Q8IY21 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX60Q8IY21 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.07■■□□□ 1.76
DDX60Q8IY21 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX60Q8IY21 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX60Q8IY21 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.06■■□□□ 1.76
DDX60Q8IY21 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX60Q8IY21 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.06■■□□□ 1.76
DDX60Q8IY21 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX60Q8IY21 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX60Q8IY21 AC245052.3-201ENST00000450182 901 ntBASIC26.06■■□□□ 1.76
DDX60Q8IY21 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.06■■□□□ 1.76
DDX60Q8IY21 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.06■■□□□ 1.76
DDX60Q8IY21 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.06■■□□□ 1.76
DDX60Q8IY21 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX60Q8IY21 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX60Q8IY21 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.06■■□□□ 1.76
DDX60Q8IY21 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.06■■□□□ 1.76
DDX60Q8IY21 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.06■■□□□ 1.76
DDX60Q8IY21 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX60Q8IY21 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX60Q8IY21 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
DDX60Q8IY21 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.05■■□□□ 1.76
DDX60Q8IY21 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.05■■□□□ 1.76
DDX60Q8IY21 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
DDX60Q8IY21 CYP2T3P-201ENST00000601990 817 ntBASIC26.05■■□□□ 1.76
DDX60Q8IY21 AC133561.1-201ENST00000568600 2415 ntBASIC26.05■■□□□ 1.76
DDX60Q8IY21 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX60Q8IY21 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX60Q8IY21 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX60Q8IY21 AC007322.3-201ENST00000426526 701 ntBASIC26.05■■□□□ 1.76
DDX60Q8IY21 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.05■■□□□ 1.76
DDX60Q8IY21 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.05■■□□□ 1.76
DDX60Q8IY21 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.05■■□□□ 1.76
DDX60Q8IY21 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.05■■□□□ 1.76
DDX60Q8IY21 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
DDX60Q8IY21 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.04■■□□□ 1.76
DDX60Q8IY21 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms