Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 AC027702.1-201ENST00000563810 1770 ntBASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 AP005435.1-201ENST00000529293 1178 ntBASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRTM1Q86UE6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 SRD5A1P1-201ENST00000442297 786 ntBASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 MIR3621-201ENST00000580529 85 ntBASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 AC092171.4-201ENST00000609130 632 ntBASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM1Q86UE6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 AC121338.2-201ENST00000622535 1744 ntBASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 AC007952.6-201ENST00000573168 2673 ntBASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 AC003957.1-201ENST00000625108 2673 ntBASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRRTM1Q86UE6 AL391422.3-201ENST00000603791 2761 ntBASIC18.14■□□□□ 0.5
LRRTM1Q86UE6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRRTM1Q86UE6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.14■□□□□ 0.5
LRRTM1Q86UE6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRTM1Q86UE6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms