Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 AP006587.3-201ENST00000525742 1516 ntBASIC21.67■■□□□ 1.06
PRPF39Q86UA1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 AC137761.2-201ENST00000561729 223 ntBASIC21.67■■□□□ 1.06
PRPF39Q86UA1 AC145350.3-201ENST00000569033 163 ntBASIC21.67■■□□□ 1.06
PRPF39Q86UA1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF39Q86UA1 FEM1AP4-201ENST00000443167 1987 ntBASIC21.67■■□□□ 1.06
PRPF39Q86UA1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 AP004607.4-201ENST00000530158 1459 ntBASIC21.66■■□□□ 1.06
PRPF39Q86UA1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF39Q86UA1 AC009237.3-201ENST00000393279 1427 ntBASIC21.65■■□□□ 1.06
PRPF39Q86UA1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF39Q86UA1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.64■■□□□ 1.06
PRPF39Q86UA1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRPF39Q86UA1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.64■■□□□ 1.06
PRPF39Q86UA1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRPF39Q86UA1 AC003102.1-202ENST00000563394 1796 ntBASIC21.64■■□□□ 1.06
PRPF39Q86UA1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.64■■□□□ 1.06
PRPF39Q86UA1 AC055733.4-201ENST00000638462 1354 ntBASIC21.64■■□□□ 1.06
PRPF39Q86UA1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 KRT19P1-201ENST00000405746 1186 ntBASIC21.64■■□□□ 1.05
PRPF39Q86UA1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF39Q86UA1 AC004854.2-201ENST00000608450 1441 ntBASIC21.63■■□□□ 1.05
PRPF39Q86UA1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 AC005224.4-201ENST00000583262 1652 ntBASIC21.63■■□□□ 1.05
PRPF39Q86UA1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 KRT18P61-201ENST00000585825 1298 ntBASIC21.63■■□□□ 1.05
PRPF39Q86UA1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRPF39Q86UA1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 AC006015.1-201ENST00000429970 570 ntBASIC21.62■■□□□ 1.05
PRPF39Q86UA1 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF39Q86UA1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms