Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF44Q7L0R7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 AC011767.1-201ENST00000617410 1153 ntBASIC20.1■□□□□ 0.81
RNF44Q7L0R7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RNF44Q7L0R7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 AC080038.1-201ENST00000611274 1154 ntBASIC20.09■□□□□ 0.81
RNF44Q7L0R7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF44Q7L0R7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.08■□□□□ 0.81
RNF44Q7L0R7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RNF44Q7L0R7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RNF44Q7L0R7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
RNF44Q7L0R7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF44Q7L0R7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.08■□□□□ 0.8
RNF44Q7L0R7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.08■□□□□ 0.8
RNF44Q7L0R7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RNF44Q7L0R7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF44Q7L0R7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RNF44Q7L0R7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 AC073111.5-205ENST00000641717 521 ntBASIC20.07■□□□□ 0.8
RNF44Q7L0R7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF44Q7L0R7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms