Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PACS1Q6VY07 MIR6084-201ENST00000622012 110 ntBASIC21.14■□□□□ 0.97
PACS1Q6VY07 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.14■□□□□ 0.97
PACS1Q6VY07 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PACS1Q6VY07 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PACS1Q6VY07 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PACS1Q6VY07 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PACS1Q6VY07 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 AC055733.4-201ENST00000638462 1354 ntBASIC21.13■□□□□ 0.97
PACS1Q6VY07 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PACS1Q6VY07 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PACS1Q6VY07 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PACS1Q6VY07 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PACS1Q6VY07 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.13■□□□□ 0.97
PACS1Q6VY07 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PACS1Q6VY07 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PACS1Q6VY07 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PACS1Q6VY07 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PACS1Q6VY07 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.12■□□□□ 0.97
PACS1Q6VY07 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.12■□□□□ 0.97
PACS1Q6VY07 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.12■□□□□ 0.97
PACS1Q6VY07 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PACS1Q6VY07 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.12■□□□□ 0.97
PACS1Q6VY07 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.12■□□□□ 0.97
PACS1Q6VY07 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PACS1Q6VY07 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PACS1Q6VY07 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PACS1Q6VY07 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PACS1Q6VY07 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PACS1Q6VY07 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PACS1Q6VY07 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PACS1Q6VY07 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PACS1Q6VY07 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 LINC01521-201ENST00000504184 1943 ntBASIC21.1■□□□□ 0.97
PACS1Q6VY07 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PACS1Q6VY07 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.1■□□□□ 0.97
PACS1Q6VY07 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.1■□□□□ 0.97
PACS1Q6VY07 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.1■□□□□ 0.97
PACS1Q6VY07 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PACS1Q6VY07 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.09■□□□□ 0.97
PACS1Q6VY07 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PACS1Q6VY07 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.09■□□□□ 0.97
PACS1Q6VY07 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PACS1Q6VY07 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PACS1Q6VY07 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PACS1Q6VY07 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.09■□□□□ 0.97
PACS1Q6VY07 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PACS1Q6VY07 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.09■□□□□ 0.97
PACS1Q6VY07 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.09■□□□□ 0.97
PACS1Q6VY07 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms