Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 RPPH1-201ENST00000516869 333 ntBASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CNKSR3Q6P9H4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 KRT17P3-201ENST00000420566 1262 ntBASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 C1QBPP2-201ENST00000528754 825 ntBASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CNKSR3Q6P9H4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CNKSR3Q6P9H4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CNKSR3Q6P9H4 AC092368.3-202ENST00000574180 1591 ntBASIC22.72■■□□□ 1.23
CNKSR3Q6P9H4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CNKSR3Q6P9H4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CNKSR3Q6P9H4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.72■■□□□ 1.23
CNKSR3Q6P9H4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.72■■□□□ 1.23
CNKSR3Q6P9H4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CNKSR3Q6P9H4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CNKSR3Q6P9H4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.71■■□□□ 1.23
CNKSR3Q6P9H4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 KRT18P68-201ENST00000392293 1000 ntBASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 RN7SL471P-201ENST00000580476 299 ntBASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 MIR4497-201ENST00000583208 89 ntBASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CNKSR3Q6P9H4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.69■■□□□ 1.22
CNKSR3Q6P9H4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms