Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VARS2Q5ST30 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VARS2Q5ST30 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VARS2Q5ST30 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.28■■□□□ 1.16
VARS2Q5ST30 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
VARS2Q5ST30 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.28■■□□□ 1.16
VARS2Q5ST30 RARRES2P4-201ENST00000514074 484 ntBASIC22.28■■□□□ 1.16
VARS2Q5ST30 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.28■■□□□ 1.16
VARS2Q5ST30 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.28■■□□□ 1.16
VARS2Q5ST30 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.28■■□□□ 1.16
VARS2Q5ST30 GUSBP5-202ENST00000510805 1989 ntBASIC22.28■■□□□ 1.16
VARS2Q5ST30 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.27■■□□□ 1.16
VARS2Q5ST30 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.27■■□□□ 1.16
VARS2Q5ST30 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VARS2Q5ST30 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VARS2Q5ST30 AC233723.2-201ENST00000623798 2106 ntBASIC22.27■■□□□ 1.16
VARS2Q5ST30 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VARS2Q5ST30 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VARS2Q5ST30 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.27■■□□□ 1.16
VARS2Q5ST30 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.27■■□□□ 1.16
VARS2Q5ST30 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VARS2Q5ST30 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.27■■□□□ 1.16
VARS2Q5ST30 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.27■■□□□ 1.16
VARS2Q5ST30 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VARS2Q5ST30 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VARS2Q5ST30 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.27■■□□□ 1.16
VARS2Q5ST30 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
VARS2Q5ST30 BX276092.2-201ENST00000417668 665 ntBASIC22.26■■□□□ 1.15
VARS2Q5ST30 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 AC245052.3-201ENST00000450182 901 ntBASIC22.26■■□□□ 1.15
VARS2Q5ST30 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.26■■□□□ 1.15
VARS2Q5ST30 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.26■■□□□ 1.15
VARS2Q5ST30 AC092118.2-201ENST00000613495 667 ntBASIC22.26■■□□□ 1.15
VARS2Q5ST30 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VARS2Q5ST30 AC010980.2-201ENST00000587099 1412 ntBASIC22.25■■□□□ 1.15
VARS2Q5ST30 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VARS2Q5ST30 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.25■■□□□ 1.15
VARS2Q5ST30 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VARS2Q5ST30 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VARS2Q5ST30 AC091799.1-201ENST00000422823 811 ntBASIC22.25■■□□□ 1.15
VARS2Q5ST30 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.25■■□□□ 1.15
VARS2Q5ST30 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VARS2Q5ST30 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
VARS2Q5ST30 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
VARS2Q5ST30 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.25■■□□□ 1.15
VARS2Q5ST30 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VARS2Q5ST30 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.25■■□□□ 1.15
VARS2Q5ST30 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.25■■□□□ 1.15
VARS2Q5ST30 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VARS2Q5ST30 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
VARS2Q5ST30 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
VARS2Q5ST30 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VARS2Q5ST30 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.24■■□□□ 1.15
VARS2Q5ST30 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
VARS2Q5ST30 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.24■■□□□ 1.15
VARS2Q5ST30 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VARS2Q5ST30 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VARS2Q5ST30 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VARS2Q5ST30 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
VARS2Q5ST30 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VARS2Q5ST30 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VARS2Q5ST30 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VARS2Q5ST30 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
VARS2Q5ST30 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VARS2Q5ST30 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.23■■□□□ 1.15
VARS2Q5ST30 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.23■■□□□ 1.15
VARS2Q5ST30 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VARS2Q5ST30 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.23■■□□□ 1.15
VARS2Q5ST30 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VARS2Q5ST30 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
VARS2Q5ST30 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
VARS2Q5ST30 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.22■■□□□ 1.15
VARS2Q5ST30 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.22■■□□□ 1.15
VARS2Q5ST30 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.22■■□□□ 1.15
VARS2Q5ST30 MIR4651-201ENST00000582622 73 ntBASIC22.22■■□□□ 1.15
VARS2Q5ST30 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
VARS2Q5ST30 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
VARS2Q5ST30 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
VARS2Q5ST30 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VARS2Q5ST30 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms