Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 AC013268.1-206ENST00000638368 961 ntBASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 AC112229.1-201ENST00000639295 961 ntBASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39AQ5SRH9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
TTC39AQ5SRH9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 AC005181.1-201ENST00000604782 1256 ntBASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 FBXW4P1-201ENST00000426721 2239 ntBASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
TTC39AQ5SRH9 RBM17P2-201ENST00000616397 1405 ntBASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39AQ5SRH9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39AQ5SRH9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 AL050303.2-201ENST00000619798 666 ntBASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39AQ5SRH9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 ID1-201ENST00000376105 1233 ntBASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC39AQ5SRH9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 AC007322.4-201ENST00000509611 723 ntBASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
TTC39AQ5SRH9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms