Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 PRORSD1P-201ENST00000295112 541 ntBASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 AC091799.1-201ENST00000422823 811 ntBASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 AP006294.2-201ENST00000641667 209 ntBASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.81■□□□□ 0.6
KRTCAP3Q53RY4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRTCAP3Q53RY4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 AC093827.2-201ENST00000512654 315 ntBASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRTCAP3Q53RY4 AC127496.7-201ENST00000625110 1798 ntBASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 AC133561.1-201ENST00000568600 2415 ntBASIC18.78■□□□□ 0.6
KRTCAP3Q53RY4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KRTCAP3Q53RY4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KRTCAP3Q53RY4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRTCAP3Q53RY4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
KRTCAP3Q53RY4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.77■□□□□ 0.6
KRTCAP3Q53RY4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.77■□□□□ 0.6
KRTCAP3Q53RY4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRTCAP3Q53RY4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRTCAP3Q53RY4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRTCAP3Q53RY4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
KRTCAP3Q53RY4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 UNC93B5-201ENST00000530315 699 ntBASIC18.76■□□□□ 0.59
KRTCAP3Q53RY4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms