Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 KRT18P20-201ENST00000548986 1279 ntBASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE4Q2TBC4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 AL162430.1-201ENST00000480705 870 ntBASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 AL049796.1-201ENST00000565336 1766 ntBASIC19.55■□□□□ 0.72
PRICKLE4Q2TBC4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 KRT16P2-201ENST00000414673 1423 ntBASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 AC120498.10-201ENST00000621827 505 ntBASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.54■□□□□ 0.72
PRICKLE4Q2TBC4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE4Q2TBC4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PRICKLE4Q2TBC4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PRICKLE4Q2TBC4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRICKLE4Q2TBC4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
PRICKLE4Q2TBC4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRICKLE4Q2TBC4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRICKLE4Q2TBC4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
PRICKLE4Q2TBC4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE4Q2TBC4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms