Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.41■□□□□ 0.7
CD47Q08722 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD47Q08722 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CD47Q08722 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD47Q08722 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD47Q08722 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD47Q08722 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.41■□□□□ 0.7
CD47Q08722 DUX4L19-201ENST00000557448 1267 ntBASIC19.41■□□□□ 0.7
CD47Q08722 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.41■□□□□ 0.7
CD47Q08722 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.41■□□□□ 0.7
CD47Q08722 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD47Q08722 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.41■□□□□ 0.7
CD47Q08722 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.41■□□□□ 0.7
CD47Q08722 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD47Q08722 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD47Q08722 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
CD47Q08722 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.4■□□□□ 0.7
CD47Q08722 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD47Q08722 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CD47Q08722 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD47Q08722 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.4■□□□□ 0.7
CD47Q08722 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.4■□□□□ 0.7
CD47Q08722 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.4■□□□□ 0.7
CD47Q08722 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.4■□□□□ 0.7
CD47Q08722 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD47Q08722 AC079089.2-201ENST00000531211 1277 ntBASIC19.4■□□□□ 0.7
CD47Q08722 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.4■□□□□ 0.7
CD47Q08722 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.4■□□□□ 0.7
CD47Q08722 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.4■□□□□ 0.7
CD47Q08722 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.4■□□□□ 0.7
CD47Q08722 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.4■□□□□ 0.7
CD47Q08722 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD47Q08722 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.4■□□□□ 0.7
CD47Q08722 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD47Q08722 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CD47Q08722 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD47Q08722 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD47Q08722 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.39■□□□□ 0.7
CD47Q08722 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.39■□□□□ 0.69
CD47Q08722 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CD47Q08722 AL136116.3-201ENST00000402907 1138 ntBASIC19.39■□□□□ 0.69
CD47Q08722 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.39■□□□□ 0.69
CD47Q08722 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CD47Q08722 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CD47Q08722 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
CD47Q08722 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.39■□□□□ 0.69
CD47Q08722 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.39■□□□□ 0.69
CD47Q08722 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CD47Q08722 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD47Q08722 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.39■□□□□ 0.69
CD47Q08722 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CD47Q08722 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 SERBP1P1-201ENST00000396021 1160 ntBASIC19.38■□□□□ 0.69
CD47Q08722 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.38■□□□□ 0.69
CD47Q08722 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.38■□□□□ 0.69
CD47Q08722 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.38■□□□□ 0.69
CD47Q08722 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.38■□□□□ 0.69
CD47Q08722 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD47Q08722 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.38■□□□□ 0.69
CD47Q08722 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.37■□□□□ 0.69
CD47Q08722 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CD47Q08722 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.37■□□□□ 0.69
CD47Q08722 OR2I1P-207ENST00000453522 948 ntBASIC19.37■□□□□ 0.69
CD47Q08722 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.37■□□□□ 0.69
CD47Q08722 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CD47Q08722 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CD47Q08722 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD47Q08722 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms