Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TP53BP2-212ENST00000494100 701 ntTSL 36.07□□□□□ -1.449e-7■■■□□ 16.4
LSM11P83369 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.489e-7■■■□□ 16.4
LSM11P83369 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.63□□□□□ -1.519e-7■■■□□ 16.4
LSM11P83369 COPS7B-220ENST00000479430 550 ntTSL 35.19□□□□□ -1.589e-7■■■□□ 16.4
LSM11P83369 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.08□□□□□ -1.69e-7■■■□□ 16.4
LSM11P83369 FER-204ENST00000504143 3132 ntTSL 55□□□□□ -1.619e-7■■■□□ 16.4
LSM11P83369 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.879e-7■■■□□ 16.4
LSM11P83369 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.143e-6■■■□□ 16.4
LSM11P83369 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.033e-6■■■□□ 16.4
LSM11P83369 RCCD1-208ENST00000557266 2110 ntTSL 1 (best)21.32■■□□□ 13e-6■■■□□ 16.4
LSM11P83369 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.675e-8■■■□□ 16.4
LSM11P83369 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.553e-6■■■□□ 16.4
LSM11P83369 RCCD1-204ENST00000555737 3157 ntTSL 1 (best)17■□□□□ 0.313e-6■■■□□ 16.4
LSM11P83369 NSUN2-209ENST00000514127 614 ntTSL 312.32□□□□□ -0.445e-8■■■□□ 16.4
LSM11P83369 UCKL1-204ENST00000430743 888 ntTSL 311.82□□□□□ -0.522e-9■■■□□ 16.4
LSM11P83369 RCCD1-209ENST00000557750 1696 ntTSL 310.9□□□□□ -0.663e-6■■■□□ 16.4
LSM11P83369 TTC17-201ENST00000039989 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.88e-7■■■□□ 16.4
LSM11P83369 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.312e-9■■■□□ 16.4
LSM11P83369 TTC17-212ENST00000533072 2607 ntTSL 1 (best)5.94□□□□□ -1.468e-7■■■□□ 16.4
LSM11P83369 TTC17-207ENST00000525543 3142 ntTSL 25.12□□□□□ -1.598e-7■■■□□ 16.4
LSM11P83369 ABHD17A-206ENST00000592757 740 ntTSL 317.03■□□□□ 0.324e-8■■■□□ 16.4
LSM11P83369 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.48■□□□□ 0.074e-8■■■□□ 16.4
LSM11P83369 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.08□□□□□ -0.157e-14■■■□□ 16.3
LSM11P83369 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.02□□□□□ -0.177e-14■■■□□ 16.3
LSM11P83369 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.27e-14■■■□□ 16.3
LSM11P83369 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.27e-14■■■□□ 16.3
LSM11P83369 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.78□□□□□ -0.27e-14■■■□□ 16.3
LSM11P83369 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)13.09□□□□□ -0.317e-14■■■□□ 16.3
LSM11P83369 CXXC5-209ENST00000507139 472 ntTSL 418.91■□□□□ 0.624e-6■■■□□ 16.3
LSM11P83369 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.574e-6■■■□□ 16.3
LSM11P83369 CXXC5-206ENST00000504844 777 ntTSL 218.32■□□□□ 0.524e-6■■■□□ 16.3
LSM11P83369 CXXC5-203ENST00000502336 581 ntTSL 417.08■□□□□ 0.324e-6■■■□□ 16.3
LSM11P83369 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.264e-6■■■□□ 16.3
LSM11P83369 CXXC5-202ENST00000502295 503 ntTSL 414.17□□□□□ -0.144e-6■■■□□ 16.3
LSM11P83369 CXXC5-216ENST00000520967 878 ntTSL 313.84□□□□□ -0.194e-6■■■□□ 16.3
LSM11P83369 CXXC5-207ENST00000504944 568 ntTSL 312.68□□□□□ -0.384e-6■■■□□ 16.3
LSM11P83369 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.77□□□□□ -0.052e-7■■■□□ 16.3
LSM11P83369 DOT1L-203ENST00000452696 624 ntTSL 312.82□□□□□ -0.366e-7■■■□□ 16.3
LSM11P83369 MST1L-201ENST00000442552 2185 ntBASIC14.86□□□□□ -0.035e-7■■■□□ 16.3
LSM11P83369 MST1L-202ENST00000455405 3184 ntTSL 1 (best) BASIC10.2□□□□□ -0.785e-7■■■□□ 16.3
LSM11P83369 MST1L-205ENST00000624762 3995 ntTSL 59.7□□□□□ -0.865e-7■■■□□ 16.3
LSM11P83369 C20orf204-201ENST00000358393 1466 ntTSL 222.69■■□□□ 1.226e-7■■■□□ 16.3
LSM11P83369 C20orf204-204ENST00000463337 1412 ntAPPRIS ALT2 TSL 1 (best)20.07■□□□□ 0.86e-7■■■□□ 16.3
LSM11P83369 DNAJB2-210ENST00000472019 1419 ntTSL 323.48■■□□□ 1.359e-7■■■□□ 16.2
LSM11P83369 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.259e-7■■■□□ 16.2
LSM11P83369 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.36■□□□□ 0.219e-7■■■□□ 16.2
LSM11P83369 DNAJB2-213ENST00000477917 4487 ntTSL 213.88□□□□□ -0.199e-7■■■□□ 16.2
LSM11P83369 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.026e-6■■■□□ 16.2
LSM11P83369 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.086e-6■■■□□ 16.2
LSM11P83369 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.176e-6■■■□□ 16.2
LSM11P83369 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.196e-6■■■□□ 16.2
LSM11P83369 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.076e-6■■■□□ 16.2
LSM11P83369 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.014e-11■■■□□ 16.2
LSM11P83369 RFNG-207ENST00000580953 2082 ntTSL 517.68■□□□□ 0.424e-11■■■□□ 16.2
LSM11P83369 RFNG-205ENST00000580793 1755 ntTSL 1 (best)15.96■□□□□ 0.154e-11■■■□□ 16.2
LSM11P83369 RFNG-208ENST00000582478 3107 ntTSL 1 (best)15.14■□□□□ 0.014e-11■■■□□ 16.2
LSM11P83369 RFNG-209ENST00000583784 2886 nt13.82□□□□□ -0.24e-11■■■□□ 16.2
LSM11P83369 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.052e-6■■■□□ 16.2
LSM11P83369 PNCK-221ENST00000466074 1564 ntTSL 218.62■□□□□ 0.572e-6■■■□□ 16.2
LSM11P83369 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.422e-6■■■□□ 16.2
LSM11P83369 PNCK-224ENST00000472324 2143 ntTSL 1 (best)16.57■□□□□ 0.242e-6■■■□□ 16.2
LSM11P83369 PNCK-213ENST00000438984 326 ntTSL 316.44■□□□□ 0.222e-6■■■□□ 16.2
LSM11P83369 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.39■□□□□ 0.212e-6■■■□□ 16.2
LSM11P83369 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.155e-6■■■□□ 16.2
LSM11P83369 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15□□□□□ -0.012e-6■■■□□ 16.2
LSM11P83369 AP1G2-229ENST00000557132 474 ntTSL 310.8□□□□□ -0.682e-9■■■□□ 16.2
LSM11P83369 TCF3-210ENST00000587235 986 ntTSL 521.9■■□□□ 1.13e-6■■■□□ 16.2
LSM11P83369 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21■□□□□ 0.953e-6■■■□□ 16.2
LSM11P83369 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.52■□□□□ 0.243e-6■■■□□ 16.2
LSM11P83369 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.39■□□□□ 0.211e-6■■■□□ 16.2
LSM11P83369 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.39■□□□□ 0.211e-6■■■□□ 16.2
LSM11P83369 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.161e-6■■■□□ 16.2
LSM11P83369 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.11e-6■■■□□ 16.2
LSM11P83369 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.281e-6■■■□□ 16.2
LSM11P83369 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.579e-10■■■□□ 16.2
LSM11P83369 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.539e-10■■■□□ 16.2
LSM11P83369 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.49e-10■■■□□ 16.2
LSM11P83369 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.279e-10■■■□□ 16.2
LSM11P83369 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.149e-10■■■□□ 16.2
LSM11P83369 NDRG2-244ENST00000555650 1588 ntTSL 215□□□□□ -0.019e-10■■■□□ 16.2
LSM11P83369 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.019e-10■■■□□ 16.2
LSM11P83369 NDRG2-271ENST00000557353 1919 ntTSL 214.72□□□□□ -0.059e-10■■■□□ 16.2
LSM11P83369 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.069e-10■■■□□ 16.2
LSM11P83369 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.69□□□□□ -0.069e-10■■■□□ 16.2
LSM11P83369 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.119e-10■■■□□ 16.2
LSM11P83369 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.119e-10■■■□□ 16.2
LSM11P83369 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.34□□□□□ -0.119e-10■■■□□ 16.2
LSM11P83369 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.14□□□□□ -0.159e-10■■■□□ 16.2
LSM11P83369 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.279e-10■■■□□ 16.2
LSM11P83369 NDRG2-258ENST00000556716 2718 ntTSL 212.71□□□□□ -0.379e-10■■■□□ 16.2
LSM11P83369 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.48□□□□□ -0.419e-10■■■□□ 16.2
LSM11P83369 NDRG2-274ENST00000557633 527 ntTSL 310.41□□□□□ -0.749e-10■■■□□ 16.2
LSM11P83369 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.75□□□□□ -0.054e-7■■■□□ 16.2
LSM11P83369 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.114e-7■■■□□ 16.2
LSM11P83369 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.97□□□□□ -0.174e-7■■■□□ 16.2
LSM11P83369 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.85□□□□□ -0.194e-7■■■□□ 16.2
LSM11P83369 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.63□□□□□ -0.234e-7■■■□□ 16.2
LSM11P83369 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.48□□□□□ -0.258e-7■■■□□ 16.2
LSM11P83369 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.18□□□□□ -0.34e-7■■■□□ 16.2
LSM11P83369 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.34e-7■■■□□ 16.2
Retrieved 100 of 11,495 protein–RNA pairs in 63.7 ms