Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RAE1P78406 PLK5-205ENST00000642079 1969 ntBASIC19.92■□□□□ 0.78
RAE1P78406 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAE1P78406 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.92■□□□□ 0.78
RAE1P78406 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.92■□□□□ 0.78
RAE1P78406 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAE1P78406 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAE1P78406 AC079140.4-201ENST00000507448 529 ntBASIC19.92■□□□□ 0.78
RAE1P78406 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAE1P78406 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.92■□□□□ 0.78
RAE1P78406 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RAE1P78406 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAE1P78406 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAE1P78406 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAE1P78406 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.92■□□□□ 0.78
RAE1P78406 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAE1P78406 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAE1P78406 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.91■□□□□ 0.78
RAE1P78406 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAE1P78406 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RAE1P78406 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAE1P78406 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAE1P78406 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAE1P78406 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAE1P78406 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAE1P78406 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAE1P78406 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.91■□□□□ 0.78
RAE1P78406 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.91■□□□□ 0.78
RAE1P78406 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.91■□□□□ 0.78
RAE1P78406 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAE1P78406 KRT87P-202ENST00000534226 1464 ntBASIC19.91■□□□□ 0.78
RAE1P78406 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.91■□□□□ 0.78
RAE1P78406 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAE1P78406 AL157384.1-201ENST00000445995 2473 ntBASIC19.91■□□□□ 0.78
RAE1P78406 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.9■□□□□ 0.78
RAE1P78406 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RAE1P78406 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.9■□□□□ 0.78
RAE1P78406 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAE1P78406 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.9■□□□□ 0.78
RAE1P78406 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAE1P78406 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAE1P78406 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAE1P78406 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.9■□□□□ 0.78
RAE1P78406 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAE1P78406 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAE1P78406 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RAE1P78406 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.89■□□□□ 0.77
RAE1P78406 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAE1P78406 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAE1P78406 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAE1P78406 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAE1P78406 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAE1P78406 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.89■□□□□ 0.77
RAE1P78406 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAE1P78406 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RAE1P78406 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAE1P78406 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RAE1P78406 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.89■□□□□ 0.77
RAE1P78406 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAE1P78406 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.89■□□□□ 0.77
RAE1P78406 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAE1P78406 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAE1P78406 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RAE1P78406 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAE1P78406 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAE1P78406 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAE1P78406 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.88■□□□□ 0.77
RAE1P78406 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAE1P78406 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAE1P78406 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAE1P78406 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.87■□□□□ 0.77
RAE1P78406 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RAE1P78406 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.87■□□□□ 0.77
RAE1P78406 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 LINC02228-203ENST00000641970 1355 ntBASIC19.87■□□□□ 0.77
RAE1P78406 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 ZNRF2P3-201ENST00000424200 374 ntBASIC19.87■□□□□ 0.77
RAE1P78406 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.87■□□□□ 0.77
RAE1P78406 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 AC006128.1-201ENST00000624704 1661 ntBASIC19.87■□□□□ 0.77
RAE1P78406 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAE1P78406 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAE1P78406 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RAE1P78406 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAE1P78406 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RAE1P78406 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.86■□□□□ 0.77
RAE1P78406 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAE1P78406 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms