Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PRRX1P54821 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.21■□□□□ 0.35
PRRX1P54821 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.21■□□□□ 0.35
PRRX1P54821 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.21■□□□□ 0.35
PRRX1P54821 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.21■□□□□ 0.35
PRRX1P54821 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.21■□□□□ 0.35
PRRX1P54821 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.21■□□□□ 0.35
PRRX1P54821 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRRX1P54821 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRRX1P54821 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PRRX1P54821 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.21■□□□□ 0.34
PRRX1P54821 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.21■□□□□ 0.34
PRRX1P54821 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PRRX1P54821 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRRX1P54821 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.2■□□□□ 0.34
PRRX1P54821 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.2■□□□□ 0.34
PRRX1P54821 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.2■□□□□ 0.34
PRRX1P54821 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.2■□□□□ 0.34
PRRX1P54821 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 AC008175.2-201ENST00000612840 297 ntBASIC17.2■□□□□ 0.34
PRRX1P54821 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRRX1P54821 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.2■□□□□ 0.34
PRRX1P54821 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRRX1P54821 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.2■□□□□ 0.34
PRRX1P54821 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRRX1P54821 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.19■□□□□ 0.34
PRRX1P54821 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.19■□□□□ 0.34
PRRX1P54821 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.19■□□□□ 0.34
PRRX1P54821 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRRX1P54821 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRRX1P54821 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.19■□□□□ 0.34
PRRX1P54821 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.19■□□□□ 0.34
PRRX1P54821 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.19■□□□□ 0.34
PRRX1P54821 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.19■□□□□ 0.34
PRRX1P54821 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.19■□□□□ 0.34
PRRX1P54821 AC120498.10-201ENST00000621827 505 ntBASIC17.19■□□□□ 0.34
PRRX1P54821 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRRX1P54821 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRRX1P54821 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.19■□□□□ 0.34
PRRX1P54821 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRRX1P54821 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRRX1P54821 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRRX1P54821 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRRX1P54821 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRRX1P54821 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.18■□□□□ 0.34
PRRX1P54821 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.18■□□□□ 0.34
PRRX1P54821 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.18■□□□□ 0.34
PRRX1P54821 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.18■□□□□ 0.34
PRRX1P54821 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PRRX1P54821 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PRRX1P54821 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.18■□□□□ 0.34
PRRX1P54821 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.18■□□□□ 0.34
PRRX1P54821 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PRRX1P54821 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PRRX1P54821 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.18■□□□□ 0.34
PRRX1P54821 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRRX1P54821 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRRX1P54821 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PRRX1P54821 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRRX1P54821 Z98882.1-201ENST00000622160 2253 ntBASIC17.17■□□□□ 0.34
PRRX1P54821 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PRRX1P54821 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRRX1P54821 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRRX1P54821 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PRRX1P54821 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PRRX1P54821 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.17■□□□□ 0.34
PRRX1P54821 POU5F1P4-201ENST00000413175 1085 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms