Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC1P51610 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.37■□□□□ 0.53
HCFC1P51610 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.37■□□□□ 0.53
HCFC1P51610 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HCFC1P51610 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC1P51610 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.37■□□□□ 0.53
HCFC1P51610 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 KRT17P1-201ENST00000399211 1546 ntBASIC18.37■□□□□ 0.53
HCFC1P51610 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
HCFC1P51610 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HCFC1P51610 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC1P51610 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1P51610 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1P51610 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1P51610 AL596275.1-201ENST00000423464 877 ntBASIC18.36■□□□□ 0.53
HCFC1P51610 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC1P51610 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.36■□□□□ 0.53
HCFC1P51610 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.36■□□□□ 0.53
HCFC1P51610 AC060766.5-201ENST00000590539 871 ntBASIC18.36■□□□□ 0.53
HCFC1P51610 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC1P51610 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1P51610 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HCFC1P51610 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HCFC1P51610 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC1P51610 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC1P51610 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HCFC1P51610 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.35■□□□□ 0.53
HCFC1P51610 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.35■□□□□ 0.53
HCFC1P51610 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
HCFC1P51610 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.35■□□□□ 0.53
HCFC1P51610 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.35■□□□□ 0.53
HCFC1P51610 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC1P51610 AC128676.1-201ENST00000454392 318 ntBASIC18.35■□□□□ 0.53
HCFC1P51610 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
HCFC1P51610 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1P51610 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HCFC1P51610 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1P51610 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.34■□□□□ 0.53
HCFC1P51610 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1P51610 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1P51610 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1P51610 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.34■□□□□ 0.53
HCFC1P51610 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1P51610 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1P51610 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1P51610 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1P51610 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
HCFC1P51610 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC1P51610 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.33■□□□□ 0.53
HCFC1P51610 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC1P51610 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC1P51610 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC1P51610 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HCFC1P51610 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC1P51610 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HCFC1P51610 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC1P51610 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.33■□□□□ 0.53
HCFC1P51610 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
HCFC1P51610 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HCFC1P51610 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1P51610 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC1P51610 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1P51610 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HCFC1P51610 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.33■□□□□ 0.52
HCFC1P51610 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1P51610 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC1P51610 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HCFC1P51610 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1P51610 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
HCFC1P51610 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1P51610 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1P51610 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1P51610 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HCFC1P51610 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.33■□□□□ 0.52
HCFC1P51610 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
HCFC1P51610 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 AC233723.2-201ENST00000623798 2106 ntBASIC18.32■□□□□ 0.52
HCFC1P51610 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HCFC1P51610 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms